Metadata-Version: 2.0
Name: galaxy
Version: 16.7.dev0
Summary: Galaxy (http://galaxyproject.org/).
Home-page: https://github.com/galaxyproject/galaxy
Author: Galaxy Project
Author-email: galaxy-dev@lists.galaxyproject.org
License: Academic Free License 3.0
Keywords: galaxy
Platform: UNKNOWN
Classifier: Development Status :: 5 - Production/Stable
Classifier: Intended Audience :: Developers
Classifier: Intended Audience :: Science/Research
Classifier: Environment :: Console
Classifier: License :: OSI Approved :: Academic Free License (AFL)
Classifier: Operating System :: POSIX
Classifier: Natural Language :: English
Classifier: Programming Language :: Python :: 2
Classifier: Programming Language :: Python :: 2.6
Classifier: Programming Language :: Python :: 2.7
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Dist: Babel (==2.0)
Requires-Dist: Beaker (==1.7.0)
Requires-Dist: Cheetah (==2.4.4)
Requires-Dist: Fabric (==1.10.2)
Requires-Dist: Mako (==1.0.2)
Requires-Dist: Markdown (==2.6.3)
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Requires-Dist: PasteDeploy (==1.5.2)
Requires-Dist: PyYAML (==3.11)
Requires-Dist: Routes (==2.2)
Requires-Dist: SQLAlchemy (==1.0.8)
Requires-Dist: Tempita (==0.5.3dev)
Requires-Dist: WebHelpers (==1.3)
Requires-Dist: WebOb (==1.4.1)
Requires-Dist: Whoosh (==2.7.4)
Requires-Dist: amqp (==1.4.8)
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Requires-Dist: bioblend (==0.7.0)
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Requires-Dist: decorator (==4.0.2)
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Requires-Dist: docutils (==0.12)
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Requires-Dist: kombu (==3.0.30)
Requires-Dist: mercurial (==3.7.3)
Requires-Dist: nose (==1.3.7)
Requires-Dist: numpy (==1.9.2)
Requires-Dist: paramiko (==1.15.2)
Requires-Dist: pbr (==1.8.0)
Requires-Dist: psutil (==4.1.0)
Requires-Dist: pulsar-galaxy-lib (==0.7.0.dev4)
Requires-Dist: pycrypto (==2.6.1)
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Requires-Dist: pysam (==0.8.4+gx1)
Requires-Dist: pytz (==2015.4)
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Provides-Extra: postgresql
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.. figure:: https://wiki.galaxyproject.org/Images/GalaxyLogo?action=AttachFile&do=get&target=galaxy_project_logo.jpg
   :alt: Galaxy Logo

The latest information about Galaxy is available via `https://galaxyproject.org/ <https://galaxyproject.org/>`__

.. image:: https://img.shields.io/badge/questions-galaxy%20biostar-blue.svg
    :target: https://biostar.usegalaxy.org
    :alt: Ask a question

.. image:: https://img.shields.io/badge/chat-irc.freenode.net%23galaxyproject-blue.svg
    :target: https://webchat.freenode.net/?channels=galaxyproject
    :alt: Chat with us

.. image:: https://img.shields.io/badge/docs-release-green.svg
    :target: https://docs.galaxyproject.org/en/master/
    :alt: Release Documentation

.. image:: https://travis-ci.org/galaxyproject/galaxy.svg?branch=dev
    :target: https://travis-ci.org/galaxyproject/galaxy
    :alt: Inspect the test results

Galaxy Quickstart
=================

Galaxy requires Python 2.7 To check your python version, run:

.. code:: console

    $ python -V
    Python 2.7.3

Start Galaxy:

.. code:: console

    $ sh run.sh

Once Galaxy completes startup, you should be able to view Galaxy in your
browser at:

http://localhost:8080

You may wish to make changes from the default configuration. This can be
done in the ``config/galaxy.ini`` file. Tools can be either installed
from the Tool Shed or added manually. For details please see the Galaxy
wiki:

https://wiki.galaxyproject.org/Admin/Tools/AddToolFromToolShedTutorial

Not all dependencies are included for the tools provided in the sample
``tool_conf.xml``. A full list of external dependencies is available at:

https://wiki.galaxyproject.org/Admin/Tools/ToolDependencies

Issues and Galaxy Development
=============================

Please see `CONTRIBUTING.md <CONTRIBUTING.md>`_ .

Roadmap
=============================

Interested in the next steps for Galaxy? Take a look here: https://github.com/galaxyproject/galaxy/issues/1928


