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___peptideProphet___ ___END___
Sorting:   desc  asc
PeptideProphet:  min max
    pepXML file:
__sampleEnzyme__ digest, __searchEngine__ search engine, quantitation: __quantitationList__
displaying __numSubsetSpectra__ of __totalNumSpectra__ total spectra, page __page__ of __totalPages__
__numUniquePeptides__ unique peptides, __numUniqueStrippedPeptides__ unique stripped peptides, __numUniqueProteins__ unique proteins, __numSingleHitProteins__ single hits ___exportedSpreadsheet___
exported spreadsheet to __spreadsheetFileName__ ___END___
PepXML Viewer, 2006 SPC/ISB

currently displaying: __statusPerPage__ rows per page, sorting by __statusSortField__ (__statusSortDir__), highlighted peptide text: __statusHighlightedPeptideText__, highlighted protein text: __statusHighlightedProteinText__, highlighted spectrum text: __statusHighlightedSpectrumText__, multiple protein hits as __statusExpandProteins__ ___libra___ , displaying __statusLibraValues__ libra values ___END___ .

___asapratio___ ___END___ ___libra___ ___END___
  • rows per page:
rows per page
  • Sorting:
descending   ascending
  • hilight peptide text (regex):
  include modification (subscript) text:
  • hilight protein text (regex):
  • hilight spectrum text (regex):
  • ASAPRatio ratio display:
low to high   high to low
  • libra values:
absolute   normalized
  • multiple protein hits:
top hit only list of all hits
  • column headers:
regular condensed

select the columns you want to display.
If you want to change the order that the columns are displayed, highlight the column and use the up / down buttons.

undisplayed columns:






columns to display:


__statusFilteringSummary__ ___MASCOT___ ___END___ ___SEQUEST___ ___END___ ___PROBID___ ___END___ ___COMET___ ___END___ ___XTANDEM___ ___END___ ___PHENYX___ ___END___ ___MYRIMATCH___ ___END___ ___MS-GF+___ ___END___ ___OMSSA___ ___END___ ___INTERPROPHET___ ___END___ ___SPECTRAST___ ___END___ ___peptideProphet___ ___END___ ___asapratio___ ___END___ ___xpress___ ___END___ ___xpressANDasapratio___ ___END___
  • require peptide aa's:
  • require glycosolation motif (NxS/T) in peptides:
                include B in glycosolation motif as (N or B)xS/T :
  • required peptide text (regex allowed):
        include modification (subscript) text:
  • required protein text (regex allowed):
  • required spectrum text (regex allowed):
  • Number of tolerable enzymatic terminii (NTT):
include peptides with NTT greater than or equal to:
  • exclude charges:
1+     2+     3+     Others
  • Search results (for __searchEngine__):
  min ionScore:   require ionscore > identityscore
        require ionscore > homologyscore
+1:     min xcorr:     min deltacn:     max sprank:
+2:     min xcorr:     min deltacn:     max sprank:
+3:     min xcorr:     min deltacn:     max sprank:
min bays score: max bays score:
min zscore: max zscore:
+1:     min xcorr:     min deltacn:     max sprank:
+2:     min xcorr:     min deltacn:     max sprank:
+3:     min xcorr:     min deltacn:     max sprank:
min expect:     max expect:
min hyperscore: max hyperscore:
min nextscore: max nextscore:
min bscore: max bscore:
min yscore: max yscore:
min expect: max expect:
min zscore: max zscore:
min origScore: max origScore:
mvh:     min:     Max:
xcorr:     min:     Max:
mz fidelity:     min:     Max:
Evalue:     min:     Max:
SpecEValue:     min:     Max:
raw:     min:     Max:
denovo:     min:     Max:
Isotope Error:     min:     Max:
pvalue:     min:     Max:
expect:     min:     Max:
min iProphet probability: max iProphet probability:
min dot: max dot:
min delta dot: max delta dot:
min dot bias: max dot bias:
min mz_diff: max mz_diff:
  • PeptideProphet Probability:
    min:     Max:
  • ASAPRatio quantitation:
min ASAP Ratio max ASAP Ratio:
require valid ASAP Ratio
  • xpress quantitation:
min XPRESS Ratio: max XPRESS Ratio:
require valid XPRESS Ratio
required minimum peak area
  • xpress and asap:
  • Require xpress ratio within asap mean ± error

                __firstPageLink__ __prevPageLink__ __pageSelectionList__ __nextPageLink__ __lastPageLink__

    __tableColumnHeaders__ __tableDataRows__

    jump to __firstPageLink__ __prevPageLink__ __pageSelectionList__ __nextPageLink__ __lastPageLink__

    PepXML Viewer: __xmlFileName__
    This program displays peptide data stored in PepXML files.
    Developed at Institute for Systems Biology / Seattle Proteome Center
    version: __TPPVersionInfo__

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