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required parameter
advanced parameter
+AdditiveSeriesComputes an additive series to quantify a peptide in a set of samples.
version1.10.0
Version of the tool that generated this parameters file.
++1Instance '1' section for 'AdditiveSeries'
in[]
input files separated by blanksinput file*.featureXML
out
output XML file containg regression line and confidence intervaloutput file*.XML
mz_tolerance1
Tolerance in m/z dimension
rt_tolerance1
Tolerance in RT dimension
concentrations[]
List of spiked concentrations
feature_rt-1
RT position of the feature
feature_mz-1
m/z position of the feature
standard_rt-1
RT position of the standard
standard_mz-1
m/z position of the standard
log
Name of log file (created only when specified)
debug0
Sets the debug level
threads1
Sets the number of threads allowed to be used by the TOPP tool
no_progressfalse
Disables progress logging to command linetrue,false
testfalse
Enables the test mode (needed for internal use only)true,false
+++plotGNUplot options
write_gnuplot_outputfalse
Flag that activates the GNUplot outputtrue,false
out_gp
base file name (3 files with different extensions are created)