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required parameter
advanced parameter
+ConsensusMapNormalizerNormalizes maps of one consensusXML file
version1.10.0
Version of the tool that generated this parameters file.
++1Instance '1' section for 'ConsensusMapNormalizer'
in
input fileinput file*.consensusXML
out
output fileoutput file*.consensusXML
algorithm_typerobust_regression
The normalization algorithm that is applied.robust_regression,median,quantile
ratio_threshold0.67
Only for 'robust_regression': the parameter is used to distinguish between non-outliers (ratio_threshold < intensity ratio < 1/ratio_threshold) and outliers.0.001:1
log
Name of log file (created only when specified)
debug0
Sets the debug level
threads1
Sets the number of threads allowed to be used by the TOPP tool
no_progressfalse
Disables progress logging to command linetrue,false
testfalse
Enables the test mode (needed for internal use only)true,false