Legend:
required parameter
advanced parameter
+IDRTCalibrationCan be used to calibrate RTs of peptide hits linearly to standards.
version1.10.0
Version of the tool that generated this parameters file.
++1Instance '1' section for 'IDRTCalibration'
in
input file input file*.idXML
out
output file output file*.idXML
calibrant_1_reference0.1
The RT of the first calibrant in the reference file.
calibrant_2_reference0.9
The RT of the second calibrant in the reference file.
calibrant_1_input-1
The RT of the first calibrant in the input file. Please note that this value needs to be set. The default value -1.0 is not allowed.
calibrant_2_input-1
The RT of the second calibrant in the input file. Please note that this value needs to be set. The default value -1.0 is not allowed.
log
Name of log file (created only when specified)
debug0
Sets the debug level
threads1
Sets the number of threads allowed to be used by the TOPP tool
no_progressfalse
Disables progress logging to command linetrue,false
testfalse
Enables the test mode (needed for internal use only)true,false