Legend:
required parameter
advanced parameter
+MRMMapperMRMMapper maps measured chromatograms (mzML) and the transitions used (TraML)
version1.10.0
Version of the tool that generated this parameters file.
++1Instance '1' section for 'MRMMapper'
in
Input file containing chromatograms (converted mzXML file)input file*.mzML
tr
transition fileinput file*.TraML
out
Output file containing mapped chromatogramsoutput file*.mzML
precursor_tolerance0.1
Precursor tolerance when mapping (in Th)
product_tolerance0.1
Product tolerance when mapping (in Th)
no-strictfalse
run in non-strict mode and allow some chromatograms to not be mapped.true,false
log
Name of log file (created only when specified)
debug0
Sets the debug level
threads1
Sets the number of threads allowed to be used by the TOPP tool
no_progressfalse
Disables progress logging to command linetrue,false
testfalse
Enables the test mode (needed for internal use only)true,false