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required parameter

advanced parameter

+OpenSwathDIAPreScoringScoring spectra using the DIA scores.

version1.10.0 Version of the tool that generated this parameters file.

++1Instance '1' section for 'OpenSwathDIAPreScoring'

tr transition fileinput file*.TraML

out output fileoutput file*.tsv

swath_files[] Swath files that were used to extract the transitions. If present, SWATH specific scoring will be applied.input file*.mzML

min_upper_edge_dist0 Minimal distance to the edge to still consider a precursor, in Thomson (only in SWATH)

log Name of log file (created only when specified)

debug0 Sets the debug level

threads1 Sets the number of threads allowed to be used by the TOPP tool

no_progressfalse Disables progress logging to command linetrue,false

testfalse Enables the test mode (needed for internal use only)true,false