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required parameter

advanced parameter

+FFEvalEvaluation tool for feature detection algorithms.

version1.10.0 Version of the tool that generated this parameters file.

++1Instance '1' section for 'FFEval'

in Feature input file, which contains the data to be tested against the truth file.input file*.featureXML

truth Truth feature file that defines what features should be found.input file*.featureXML

rt_tol0.3 Allowed tolerance of RT relative to average feature RT span.0:∞

rt_tol_abs-1 Allowed absolute tolerance of RT (overwrites 'rt_tol' if set above zero).-1:∞

mz_tol0.25 Allowed tolerance in m/z (is divided by charge).0:∞

out Feature output file. If given, an annotated input file is written.output file*.featureXML

abort_reasons Feature file containing seeds with abort reasons.input file*.featureXML

out_roc If given, a ROC curve file is created (ROC points based on intensity threshold)output file*.csv

log Name of log file (created only when specified)

debug0 Sets the debug level

threads1 Sets the number of threads allowed to be used by the TOPP tool

no_progressfalse Disables progress logging to command linetrue,false

testfalse Enables the test mode (needed for internal use only)true,false