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required parameter

advanced parameter

+MapAlignmentEvaluationEvaluates alignment results against a ground truth.

version1.10.0 Version of the tool that generated this parameters file.

++1Instance '1' section for 'MapAlignmentEvaluation'

in input file: toolinput file*.consensusXML

gt input file: ground truthinput file*.consensusXML

type Caap Evaluation typeprecision,recall,F1

rt_dev0.1 Maximum allowed deviation of the retention time

mz_dev0.1 Maximum allowed deviation of m/z

int_dev100 Maximum allowed deviation of Intensity

use_chargefalse Use charge criterion when assesing if two features are identical.true,false

log Name of log file (created only when specified)

debug0 Sets the debug level

threads1 Sets the number of threads allowed to be used by the TOPP tool

no_progressfalse Disables progress logging to command linetrue,false

testfalse Enables the test mode (needed for internal use only)true,false