Home  · Classes  · Annotated Classes  · Modules  · Members  · Namespaces  · Related Pages

BinnedSpectrumCompareFunctor.h

Go to the documentation of this file.
00001 // --------------------------------------------------------------------------
00002 //                   OpenMS -- Open-Source Mass Spectrometry
00003 // --------------------------------------------------------------------------
00004 // Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
00005 // ETH Zurich, and Freie Universitaet Berlin 2002-2012.
00006 //
00007 // This software is released under a three-clause BSD license:
00008 //  * Redistributions of source code must retain the above copyright
00009 //    notice, this list of conditions and the following disclaimer.
00010 //  * Redistributions in binary form must reproduce the above copyright
00011 //    notice, this list of conditions and the following disclaimer in the
00012 //    documentation and/or other materials provided with the distribution.
00013 //  * Neither the name of any author or any participating institution
00014 //    may be used to endorse or promote products derived from this software
00015 //    without specific prior written permission.
00016 // For a full list of authors, refer to the file AUTHORS.
00017 // --------------------------------------------------------------------------
00018 // THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
00019 // AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
00020 // IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
00021 // ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING
00022 // INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
00023 // EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
00024 // PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
00025 // OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
00026 // WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
00027 // OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
00028 // ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
00029 //
00030 // --------------------------------------------------------------------------
00031 // $Maintainer: Mathias Walzer $
00032 // $Authors: $
00033 // --------------------------------------------------------------------------
00034 //
00035 #ifndef OPENMS_COMPARISON_SPECTRA_BINNEDSPECTRUMCOMPAREFUNCTOR_H
00036 #define OPENMS_COMPARISON_SPECTRA_BINNEDSPECTRUMCOMPAREFUNCTOR_H
00037 
00038 #include <OpenMS/DATASTRUCTURES/DefaultParamHandler.h>
00039 #include <OpenMS/CONCEPT/Exception.h>
00040 #include <OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h>
00041 
00042 #include <cmath>
00043 
00044 namespace OpenMS
00045 {
00046 
00058   class OPENMS_DLLAPI BinnedSpectrumCompareFunctor :
00059     public DefaultParamHandler
00060   {
00061 
00062 private:
00063 
00064 public:
00065 
00071     class OPENMS_DLLAPI IncompatibleBinning :
00072       public Exception::BaseException
00073     {
00074 public:
00075       IncompatibleBinning(const char * file, int line, const char * function, const char * message
00076                             = "compared spectra have different settings in binsize and/or binspread")  throw();
00077       virtual ~IncompatibleBinning() throw();
00078     };
00079 
00081     BinnedSpectrumCompareFunctor();
00082 
00084     BinnedSpectrumCompareFunctor(const BinnedSpectrumCompareFunctor & source);
00085 
00087     virtual ~BinnedSpectrumCompareFunctor();
00088 
00090     BinnedSpectrumCompareFunctor & operator=(const BinnedSpectrumCompareFunctor & source);
00091 
00093     virtual double operator()(const BinnedSpectrum & spec1, const BinnedSpectrum & spec2) const = 0;
00094 
00096     virtual double operator()(const BinnedSpectrum & spec) const = 0;
00097 
00099     static void registerChildren();
00100 
00102     static const String getProductName()
00103     {
00104       return "BinnedSpectrumCompareFunctor";
00105     }
00106 
00107   };
00108 
00109 
00110 }
00111 #endif // OPENMS_COMPARISON_SPECTRA_BINNEDSPECTRUMCOMPAREFUNCTOR_H

OpenMS / TOPP release 1.10.0 Documentation generated on Thu Mar 7 2013 09:42:37 using doxygen 1.7.1