EmgModel.h

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//                   OpenMS -- Open-Source Mass Spectrometry
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// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
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// $Maintainer: Clemens Groepl $
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#ifndef OPENMS_TRANSFORMATIONS_FEATUREFINDER_EMGMODEL_H
#define OPENMS_TRANSFORMATIONS_FEATUREFINDER_EMGMODEL_H

#include <OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h>
#include <OpenMS/MATH/STATISTICS/BasicStatistics.h>


namespace OpenMS
{
  class OPENMS_DLLAPI EmgModel :
    public InterpolationModel
  {

public:
    typedef InterpolationModel::CoordinateType CoordinateType;
    typedef Math::BasicStatistics<CoordinateType> BasicStatistics;
    typedef LinearInterpolation::container_type ContainerType;

    EmgModel();

    EmgModel(const EmgModel & source);

    virtual ~EmgModel();

    virtual EmgModel & operator=(const EmgModel & source);

    static BaseModel<1> * create()
    {
      return new EmgModel();
    }

    static const String getProductName()
    {
      return "EmgModel";
    }

    void setOffset(CoordinateType offset);

    void setSamples();

    CoordinateType getCenter() const;

protected:
    CoordinateType  min_;
    CoordinateType  max_;
    BasicStatistics statistics_;
    CoordinateType height_;
    CoordinateType width_;
    CoordinateType symmetry_;
    CoordinateType retention_;

    void updateMembers_();
  };
}

#endif // OPENMS_TRANSFORMATIONS_FEATUREFINDER_EMGMODEL_H