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FeatureGroupingAlgorithmQT.h

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00001 // --------------------------------------------------------------------------
00002 //                   OpenMS -- Open-Source Mass Spectrometry
00003 // --------------------------------------------------------------------------
00004 // Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
00005 // ETH Zurich, and Freie Universitaet Berlin 2002-2012.
00006 //
00007 // This software is released under a three-clause BSD license:
00008 //  * Redistributions of source code must retain the above copyright
00009 //    notice, this list of conditions and the following disclaimer.
00010 //  * Redistributions in binary form must reproduce the above copyright
00011 //    notice, this list of conditions and the following disclaimer in the
00012 //    documentation and/or other materials provided with the distribution.
00013 //  * Neither the name of any author or any participating institution
00014 //    may be used to endorse or promote products derived from this software
00015 //    without specific prior written permission.
00016 // For a full list of authors, refer to the file AUTHORS.
00017 // --------------------------------------------------------------------------
00018 // THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
00019 // AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
00020 // IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
00021 // ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING
00022 // INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
00023 // EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
00024 // PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
00025 // OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
00026 // WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
00027 // OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
00028 // ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
00029 //
00030 // --------------------------------------------------------------------------
00031 // $Maintainer: Hendrik Weisser $
00032 // $Authors: Steffen Sass, Hendrik Weisser $
00033 // --------------------------------------------------------------------------
00034 
00035 #ifndef OPENMS_ANALYSIS_MAPMATCHING_FEATUREGROUPINGALGORITHMQT_H
00036 #define OPENMS_ANALYSIS_MAPMATCHING_FEATUREGROUPINGALGORITHMQT_H
00037 
00038 #include <OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h>
00039 
00040 namespace OpenMS
00041 {
00053   class OPENMS_DLLAPI FeatureGroupingAlgorithmQT :
00054     public FeatureGroupingAlgorithm
00055   {
00056 public:
00058     FeatureGroupingAlgorithmQT();
00059 
00061     virtual ~FeatureGroupingAlgorithmQT();
00062 
00067     virtual void group(const std::vector<FeatureMap<> > & maps,
00068                        ConsensusMap & out);
00069 
00074     virtual void group(const std::vector<ConsensusMap> & maps,
00075                        ConsensusMap & out);
00076 
00078     static FeatureGroupingAlgorithm * create()
00079     {
00080       return new FeatureGroupingAlgorithmQT();
00081     }
00082 
00084     static String getProductName()
00085     {
00086       return "unlabeled_qt";
00087     }
00088 
00089 private:
00090 
00092     FeatureGroupingAlgorithmQT(const FeatureGroupingAlgorithmQT &);
00093 
00095     FeatureGroupingAlgorithmQT & operator=(const FeatureGroupingAlgorithmQT &);
00096 
00101     template <typename MapType>
00102     void group_(const std::vector<MapType> & maps,
00103                 ConsensusMap & out);
00104   };
00105 
00106 } // namespace OpenMS
00107 
00108 #endif // OPENMS_ANALYSIS_MAPMATCHING_FEATUREGROUPINGALGORITHMQT_H

OpenMS / TOPP release 1.10.0 Documentation generated on Thu Mar 7 2013 09:42:39 using doxygen 1.7.1