ISpectrumAccess.h

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#ifndef OPENMS_ANALYSIS_OPENSWATH_OPENSWATHALGO_DATAACCESS_ISPECTRUMACCESS_H
#define OPENMS_ANALYSIS_OPENSWATH_OPENSWATHALGO_DATAACCESS_ISPECTRUMACCESS_H

#include <OpenMS/ANALYSIS/OPENSWATH/OPENSWATHALGO/DATAACCESS/DataStructures.h>

#include <vector>
#include <string>
#include <boost/shared_ptr.hpp>

namespace OpenSwath
{

  class OPENSWATHALGO_DLLAPI ISpectrumAccess
  {
public:
    virtual ~ISpectrumAccess();
    virtual SpectrumPtr getSpectrumById(int id) const = 0;
    virtual std::vector<std::size_t> getSpectraByRT(double RT, double deltaRT) const = 0;
    virtual size_t getNrSpectra() const = 0;
    virtual SpectrumMeta getSpectrumMetaById(int id) const = 0;

    virtual ChromatogramPtr getChromatogramById(int id) const = 0;
    //virtual std::vector<std::size_t> getChromatogramByPrecursorMZ(double mz,
    //    double deltaMZ) const = 0;
    virtual std::size_t getNrChromatograms() const = 0;
    virtual std::string getChromatogramNativeID(int id) const = 0;
  };

  OPENSWATHALGO_DLLAPI typedef boost::shared_ptr<ISpectrumAccess> SpectrumAccessPtr;
}

#endif // OPENMS_ANALYSIS_OPENSWATH_OPENSWATHALGO_DATAACCESS_ISPECTRUMACCESS_H