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IdentificationHit.h

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00001 // --------------------------------------------------------------------------
00002 //                   OpenMS -- Open-Source Mass Spectrometry
00003 // --------------------------------------------------------------------------
00004 // Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
00005 // ETH Zurich, and Freie Universitaet Berlin 2002-2012.
00006 //
00007 // This software is released under a three-clause BSD license:
00008 //  * Redistributions of source code must retain the above copyright
00009 //    notice, this list of conditions and the following disclaimer.
00010 //  * Redistributions in binary form must reproduce the above copyright
00011 //    notice, this list of conditions and the following disclaimer in the
00012 //    documentation and/or other materials provided with the distribution.
00013 //  * Neither the name of any author or any participating institution
00014 //    may be used to endorse or promote products derived from this software
00015 //    without specific prior written permission.
00016 // For a full list of authors, refer to the file AUTHORS.
00017 // --------------------------------------------------------------------------
00018 // THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
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00020 // IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
00021 // ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING
00022 // INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
00023 // EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
00024 // PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
00025 // OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
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00029 //
00030 // --------------------------------------------------------------------------
00031 // $Maintainer: Andreas Bertsch $
00032 // $Authors: $
00033 // --------------------------------------------------------------------------
00034 
00035 #ifndef OPENMS_METADATA_IDENTIFICATIONHIT_H
00036 #define OPENMS_METADATA_IDENTIFICATIONHIT_H
00037 
00038 #include <OpenMS/METADATA/MetaInfoInterface.h>
00039 
00040 namespace OpenMS
00041 {
00049   class OPENMS_DLLAPI IdentificationHit :
00050     public MetaInfoInterface
00051   {
00052 public:
00053 
00055 
00056 
00057     IdentificationHit();
00059     virtual ~IdentificationHit();
00061     IdentificationHit(const IdentificationHit & source);
00063     IdentificationHit & operator=(const IdentificationHit & source);
00065     bool operator==(const IdentificationHit & rhs) const;
00067     bool operator!=(const IdentificationHit & rhs) const;
00069 
00071 
00072 
00073     void setId(const String & id);
00074 
00076     const String & getId() const;
00077 
00079     void setCharge(Int charge);
00080 
00082     Int getCharge() const;
00083 
00085     void setCalculatedMassToCharge(DoubleReal mz);
00086 
00088     DoubleReal getCalculatedMassToCharge() const;
00089 
00091     void setExperimentalMassToCharge(DoubleReal mz);
00092 
00094     DoubleReal getExperimentalMassToCharge() const;
00095 
00097     void setName(const String & name);
00098 
00100     const String & getName() const;
00101 
00103     void setPassThreshold(bool pass);
00104 
00106     bool getPassThreshold() const;
00107 
00109     void setRank(Int rank);
00110 
00112     Int getRank() const;
00114 
00115 
00116 protected:
00117 
00118     String id_;                                     
00119     Int charge_;                                    
00120     DoubleReal calculated_mass_to_charge_;         
00121     DoubleReal experimental_mass_to_charge_;         
00122     String name_;                               
00123     bool pass_threshold_;               
00124     Int rank_;                                      
00125   };
00126 
00127 } //namespace OpenMS
00128 #endif // OPENMS_METADATA_IDENTIFICATIONHIT_H

OpenMS / TOPP release 1.10.0 Documentation generated on Thu Mar 7 2013 09:42:40 using doxygen 1.7.1