00001 // -------------------------------------------------------------------------- 00002 // OpenMS -- Open-Source Mass Spectrometry 00003 // -------------------------------------------------------------------------- 00004 // Copyright The OpenMS Team -- Eberhard Karls University Tuebingen, 00005 // ETH Zurich, and Freie Universitaet Berlin 2002-2012. 00006 // 00007 // This software is released under a three-clause BSD license: 00008 // * Redistributions of source code must retain the above copyright 00009 // notice, this list of conditions and the following disclaimer. 00010 // * Redistributions in binary form must reproduce the above copyright 00011 // notice, this list of conditions and the following disclaimer in the 00012 // documentation and/or other materials provided with the distribution. 00013 // * Neither the name of any author or any participating institution 00014 // may be used to endorse or promote products derived from this software 00015 // without specific prior written permission. 00016 // For a full list of authors, refer to the file AUTHORS. 00017 // -------------------------------------------------------------------------- 00018 // THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 00019 // AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 00020 // IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE 00021 // ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING 00022 // INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, 00023 // EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, 00024 // PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; 00025 // OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, 00026 // WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR 00027 // OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF 00028 // ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. 00029 // 00030 // -------------------------------------------------------------------------- 00031 // $Maintainer: Lars Nilse $ 00032 // $Authors: Steffen Sass, Holger Plattfaut, Bastian Blank $ 00033 // -------------------------------------------------------------------------- 00034 00035 #ifndef OPENMS_FILTERING_DATAREDUCTION_ISOTOPEDISTRIBUTIONCACHE_H 00036 #define OPENMS_FILTERING_DATAREDUCTION_ISOTOPEDISTRIBUTIONCACHE_H 00037 00038 #include <OpenMS/KERNEL/StandardTypes.h> 00039 #include <OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h> 00040 00041 namespace OpenMS 00042 { 00046 class OPENMS_DLLAPI IsotopeDistributionCache 00047 { 00048 public: 00049 typedef FeatureFinderAlgorithmPickedHelperStructs::TheoreticalIsotopePattern TheoreticalIsotopePattern; 00050 00051 IsotopeDistributionCache(DoubleReal max_mass, DoubleReal mass_window_width, DoubleReal intensity_percentage = 0, DoubleReal intensity_percentage_optional = 0); 00052 00054 const TheoreticalIsotopePattern & getIsotopeDistribution(DoubleReal mass) const; 00055 00056 private: 00058 std::vector<TheoreticalIsotopePattern> isotope_distributions_; 00059 00060 DoubleReal mass_window_width_; 00061 }; 00062 } 00063 00064 #endif
| OpenMS / TOPP release 1.10.0 | Documentation generated on Thu Mar 7 2013 09:42:40 using doxygen 1.7.1 |