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MS2Feature.h

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00001 // --------------------------------------------------------------------------
00002 //                   OpenMS -- Open-Source Mass Spectrometry
00003 // --------------------------------------------------------------------------
00004 // Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
00005 // ETH Zurich, and Freie Universitaet Berlin 2002-2012.
00006 //
00007 // This software is released under a three-clause BSD license:
00008 //  * Redistributions of source code must retain the above copyright
00009 //    notice, this list of conditions and the following disclaimer.
00010 //  * Redistributions in binary form must reproduce the above copyright
00011 //    notice, this list of conditions and the following disclaimer in the
00012 //    documentation and/or other materials provided with the distribution.
00013 //  * Neither the name of any author or any participating institution
00014 //    may be used to endorse or promote products derived from this software
00015 //    without specific prior written permission.
00016 // For a full list of authors, refer to the file AUTHORS.
00017 // --------------------------------------------------------------------------
00018 // THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
00019 // AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
00020 // IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
00021 // ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING
00022 // INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
00023 // EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
00024 // PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
00025 // OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
00026 // WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
00027 // OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
00028 // ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
00029 //
00030 // --------------------------------------------------------------------------
00031 // $Maintainer: Florian Zeller $
00032 // $Authors: Lukas Mueller, Markus Mueller $
00033 // --------------------------------------------------------------------------
00034 //
00036 //
00037 //  written by Lukas N Mueller, 30.3.05
00038 //  Lukas.Mueller@imsb.biol.ethz.ch
00039 //  Group of Prof. Ruedi Aebersold, IMSB, ETH Hoenggerberg, Zurich
00040 //
00041 //  Ported to OpenMS by Florian Zeller, florian.zeller@bsse.ethz.ch
00042 //  December 2010
00043 //
00044 
00045 #ifndef OPENMS_TRANSFORMATIONS_FEATUREFINDER_SUPERHIRN_MS2FEATURE_H
00046 #define OPENMS_TRANSFORMATIONS_FEATUREFINDER_SUPERHIRN_MS2FEATURE_H
00047 
00048 #include <OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Fragment.h>
00049 #include <OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.h>
00050 
00051 namespace OpenMS
00052 {
00053 
00054   class OPENMS_DLLAPI MS2Feature :
00055     public ClusteredMS2ConsensusSpectrum
00056   {
00057 
00058 
00059     using ClusteredMS2ConsensusSpectrum::operator=;
00060 
00062     // declaration of the private members:
00063 
00064 private:
00065 
00066     int ID;
00067 
00069     // declaration of the public members:
00070 
00071 public:
00072 
00073 
00074     // class destructor
00075     ~MS2Feature();
00076     // class constructor
00077     MS2Feature() {}
00078     MS2Feature(MS2Fragment *);
00079     MS2Feature(double iPrecursorMZ, double iTR, int iChrg, int iApexScan);
00080 
00081     // class copy constructor
00082     MS2Feature(const MS2Feature &);
00083     // class copy constructor
00084     MS2Feature(const MS2Feature *);
00085 
00086 
00088     // overload operators:
00089     //MS2Feature& operator=(const MS2Feature&);
00090     bool operator==(const MS2Feature &);
00091     MS2Feature & operator<=(const MS2Feature &);
00092     MS2Feature & operator>=(const MS2Feature &);
00093     MS2Feature & operator<(const MS2Feature &);
00094     MS2Feature & operator>(const MS2Feature &);
00095 
00096 
00097     // show info
00098     void show_info();
00099 
00100 
00102     // start here all the get / set
00103     // function to access the
00104     // variables of the class
00105 
00106     void setID(int in){ID = in; }
00107     int getID(){return ID; }
00108 
00109 
00110   };
00111 
00112 } // ns
00113 
00114 #endif // OPENMS_TRANSFORMATIONS_FEATUREFINDER_SUPERHIRN_MS2FEATURE_H

OpenMS / TOPP release 1.10.0 Documentation generated on Thu Mar 7 2013 09:42:42 using doxygen 1.7.1