00001 // -------------------------------------------------------------------------- 00002 // OpenMS -- Open-Source Mass Spectrometry 00003 // -------------------------------------------------------------------------- 00004 // Copyright The OpenMS Team -- Eberhard Karls University Tuebingen, 00005 // ETH Zurich, and Freie Universitaet Berlin 2002-2012. 00006 // 00007 // This software is released under a three-clause BSD license: 00008 // * Redistributions of source code must retain the above copyright 00009 // notice, this list of conditions and the following disclaimer. 00010 // * Redistributions in binary form must reproduce the above copyright 00011 // notice, this list of conditions and the following disclaimer in the 00012 // documentation and/or other materials provided with the distribution. 00013 // * Neither the name of any author or any participating institution 00014 // may be used to endorse or promote products derived from this software 00015 // without specific prior written permission. 00016 // For a full list of authors, refer to the file AUTHORS. 00017 // -------------------------------------------------------------------------- 00018 // THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 00019 // AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 00020 // IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE 00021 // ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING 00022 // INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, 00023 // EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, 00024 // PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; 00025 // OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, 00026 // WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR 00027 // OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF 00028 // ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. 00029 // 00030 // -------------------------------------------------------------------------- 00031 // $Maintainer: Clemens Groepl $ 00032 // $Authors: Katharina Albers $ 00033 // -------------------------------------------------------------------------- 00034 00035 #ifndef OPENMS_ANALYSIS_MAPMATCHING_MAPALIGNMENTEVALUATIONALGORITHMPRECISION_H 00036 #define OPENMS_ANALYSIS_MAPMATCHING_MAPALIGNMENTEVALUATIONALGORITHMPRECISION_H 00037 00038 #include <OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h> 00039 00040 namespace OpenMS 00041 { 00049 class OPENMS_DLLAPI MapAlignmentEvaluationAlgorithmPrecision : 00050 public MapAlignmentEvaluationAlgorithm 00051 { 00052 public: 00054 MapAlignmentEvaluationAlgorithmPrecision(); 00055 00057 virtual ~MapAlignmentEvaluationAlgorithmPrecision(); 00058 00062 virtual void evaluate(const ConsensusMap & consensus_map_in, const ConsensusMap & consensus_map_gt, const DoubleReal & rt_dev, const DoubleReal & mz_dev, const Peak2D::IntensityType & int_dev, const bool use_charge, DoubleReal & out); 00063 00065 static MapAlignmentEvaluationAlgorithm * create() 00066 { 00067 return new MapAlignmentEvaluationAlgorithmPrecision(); 00068 } 00069 00071 static String getProductName() 00072 { 00073 return "precision"; 00074 } 00075 00076 private: 00077 00079 MapAlignmentEvaluationAlgorithmPrecision(const MapAlignmentEvaluationAlgorithmPrecision &); 00081 MapAlignmentEvaluationAlgorithmPrecision & operator=(const MapAlignmentEvaluationAlgorithmPrecision &); 00082 00083 }; 00084 00085 } // namespace OpenMS 00086 00087 #endif // OPENMS_ANALYSIS_MAPMATCHING_MAPALIGNMENTEVALUATIONALGORITHMPRECISION_H
| OpenMS / TOPP release 1.10.0 | Documentation generated on Thu Mar 7 2013 09:42:41 using doxygen 1.7.1 |