00001 // -------------------------------------------------------------------------- 00002 // OpenMS -- Open-Source Mass Spectrometry 00003 // -------------------------------------------------------------------------- 00004 // Copyright The OpenMS Team -- Eberhard Karls University Tuebingen, 00005 // ETH Zurich, and Freie Universitaet Berlin 2002-2012. 00006 // 00007 // This software is released under a three-clause BSD license: 00008 // * Redistributions of source code must retain the above copyright 00009 // notice, this list of conditions and the following disclaimer. 00010 // * Redistributions in binary form must reproduce the above copyright 00011 // notice, this list of conditions and the following disclaimer in the 00012 // documentation and/or other materials provided with the distribution. 00013 // * Neither the name of any author or any participating institution 00014 // may be used to endorse or promote products derived from this software 00015 // without specific prior written permission. 00016 // For a full list of authors, refer to the file AUTHORS. 00017 // -------------------------------------------------------------------------- 00018 // THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 00019 // AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 00020 // IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE 00021 // ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING 00022 // INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, 00023 // EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, 00024 // PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; 00025 // OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, 00026 // WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR 00027 // OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF 00028 // ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. 00029 // 00030 // -------------------------------------------------------------------------- 00031 // $Maintainer: Andreas Bertsch $ 00032 // $Authors: $ 00033 // -------------------------------------------------------------------------- 00034 00035 #ifndef OPENMS_MATH_STATISTICS_ROCCURVE_H 00036 #define OPENMS_MATH_STATISTICS_ROCCURVE_H 00037 00038 #include <OpenMS/config.h> 00039 #include <OpenMS/CONCEPT/Types.h> 00040 00041 #include <list> 00042 #include <vector> 00043 00044 namespace OpenMS 00045 { 00046 namespace Math 00047 { 00055 class OPENMS_DLLAPI ROCCurve 00056 { 00057 public: 00058 00059 // @name Constructors and Destructors 00060 // @{ 00062 ROCCurve(); 00063 00065 virtual ~ROCCurve(); 00066 00068 ROCCurve(const ROCCurve & source); 00069 // @} 00070 00071 // @name Operators 00072 // @{ 00074 ROCCurve & operator=(const ROCCurve & source); 00075 // @} 00076 00077 // @name Accessors 00078 // @{ 00080 void insertPair(double score, bool clas); 00081 00083 double AUC(); 00084 00086 std::vector<std::pair<double, double> > curve(UInt resolution = 10); 00087 00089 double cutoffPos(double fraction = 0.95); 00090 00092 double cutoffNeg(double fraction = 0.95); 00093 // @} 00094 00095 private: 00096 00098 class OPENMS_DLLAPI simsortdec 00099 { 00100 public: 00101 00102 bool operator()(const std::pair<double, bool> & a, const std::pair<double, bool> & b) 00103 { 00104 return b.first < a.first; 00105 } 00106 00107 }; 00108 00109 00110 std::list<std::pair<double, bool> > score_clas_pairs_; 00111 00112 UInt pos_; 00113 00114 UInt neg_; 00115 }; 00116 } 00117 } 00118 #endif // OPENMS_MATH_STATISTICS_ROCCURVE_H
| OpenMS / TOPP release 1.10.0 | Documentation generated on Thu Mar 7 2013 09:42:44 using doxygen 1.7.1 |