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SVOutStream.h

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00001 // --------------------------------------------------------------------------
00002 //                   OpenMS -- Open-Source Mass Spectrometry
00003 // --------------------------------------------------------------------------
00004 // Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
00005 // ETH Zurich, and Freie Universitaet Berlin 2002-2012.
00006 //
00007 // This software is released under a three-clause BSD license:
00008 //  * Redistributions of source code must retain the above copyright
00009 //    notice, this list of conditions and the following disclaimer.
00010 //  * Redistributions in binary form must reproduce the above copyright
00011 //    notice, this list of conditions and the following disclaimer in the
00012 //    documentation and/or other materials provided with the distribution.
00013 //  * Neither the name of any author or any participating institution
00014 //    may be used to endorse or promote products derived from this software
00015 //    without specific prior written permission.
00016 // For a full list of authors, refer to the file AUTHORS.
00017 // --------------------------------------------------------------------------
00018 // THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
00019 // AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
00020 // IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
00021 // ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING
00022 // INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
00023 // EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
00024 // PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
00025 // OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
00026 // WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
00027 // OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
00028 // ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
00029 //
00030 // --------------------------------------------------------------------------
00031 // $Maintainer: Hendrik Weisser $
00032 // $Authors: Hendrik Weisser $
00033 // --------------------------------------------------------------------------
00034 
00035 #ifndef OPENMS_FORMAT_SVOUTSTREAM_H
00036 #define OPENMS_FORMAT_SVOUTSTREAM_H
00037 
00038 #include <OpenMS/DATASTRUCTURES/String.h>
00039 #include <ostream>
00040 #include <boost/math/special_functions/fpclassify.hpp> // for "isnan"
00041 
00042 namespace OpenMS
00043 {
00051   class OPENMS_DLLAPI SVOutStream :
00052     public std::ostream
00053   {
00054 public:
00063     SVOutStream(std::ostream & out, const String & sep = "\t",
00064                 const String & replacement = "_",
00065                 String::QuotingMethod quoting = String::DOUBLE);
00066 
00067 
00073     SVOutStream & operator<<(String str);    // use call-by-value here
00074 
00075 
00081     SVOutStream & operator<<(const std::string & str);
00082 
00083 
00089     SVOutStream & operator<<(const char * c_str);
00090 
00091 
00097     SVOutStream & operator<<(const char c);
00098 
00099 
00101     SVOutStream & operator<<(std::ostream & (*fp)(std::ostream &));
00102 
00103 
00105     template <typename T>
00106     SVOutStream & operator<<(const T & value)
00107     {
00108       if (!newline_) (std::ostream &) * this << sep_;
00109       else newline_ = false;
00110       (std::ostream &) * this << value;
00111       return *this;
00112     }
00113 
00115     SVOutStream & write(const String & str);   // write unmodified string
00116 
00117 
00123     bool modifyStrings(bool modify);
00124 
00125 
00127     template <typename NumericT>
00128     SVOutStream & writeValueOrNan(NumericT thing)
00129     {
00130       if ((boost::math::isfinite)(thing)) return operator<<(thing);
00131 
00132       bool old = modifyStrings(false);
00133       if ((boost::math::isnan)(thing)) operator<<(nan_);
00134       else if (thing < 0) operator<<("-" + inf_);
00135       else operator<<(inf_);
00136       modifyStrings(old);
00137       return *this;
00138     }
00139 
00140 protected:
00142     String sep_;
00143 
00145     String replacement_;
00146 
00148     String nan_;
00149 
00151     String inf_;
00152 
00154     String::QuotingMethod quoting_;
00155 
00157     bool modify_strings_;
00158 
00160     bool newline_;
00161   };
00162 
00163 }
00164 
00165 #endif

OpenMS / TOPP release 1.10.0 Documentation generated on Thu Mar 7 2013 09:42:45 using doxygen 1.7.1