CVMappingTerm Class Reference [Datastructures]

Representation of controlled vocabulary term. More...

#include <OpenMS/DATASTRUCTURES/CVMappingTerm.h>

List of all members.

Public Member Functions
	CVMappingTerm ()
	Defaults constructor.
	CVMappingTerm (const CVMappingTerm &rhs)
	Copy constructor.
virtual	~CVMappingTerm ()
	Destructor.
CVMappingTerm &	operator= (const CVMappingTerm &rhs)
	Assignment operator.
Accessors
void	setAccession (const String &accession)
	sets the accession string of the term
const String &	getAccession () const
	returns the accession string of the term
void	setUseTermName (bool use_term_name)
	sets whether the term name should be used, instead of the accession
bool	getUseTermName () const
	returns whether the term name should be used, instead of the accession
void	setUseTerm (bool use_term)
	sets whether the term itself can be used (or only its children)
bool	getUseTerm () const
	returns true if the term can be used, false if only children are allowed
void	setTermName (const String &term_name)
	sets the name of the term
const String &	getTermName () const
	returns the name of the term
void	setIsRepeatable (bool is_repeatable)
	sets whether this term can be repeated
bool	getIsRepeatable () const
	returns true if this term can be repeated, false otherwise
void	setAllowChildren (bool allow_children)
	sets whether children of this term are allowed
bool	getAllowChildren () const
	returns true if the children of this term are allowed to be used
void	setCVIdentifierRef (const String &cv_identifier_ref)
	sets the cv identifier reference string, e.g. UO for unit obo
const String &	getCVIdentifierRef () const
	returns the cv identifier reference string
Predicates
String	accession_
bool	use_term_name_
bool	use_term_
String	term_name_
bool	is_repeatable_
bool	allow_children_
String	cv_identifier_ref_
bool	operator== (const CVMappingTerm &rhs) const
	equality operator
bool	operator!= (const CVMappingTerm &rhs) const
	inequality operator

---

Detailed Description

Representation of controlled vocabulary term.

This class simply stores CV terms read from e.g. an OBO-fileRepresenation of a CV term used by CVMappings

---

Constructor & Destructor Documentation

CVMappingTerm

(

)

Defaults constructor.

CVMappingTerm

(

const CVMappingTerm &

rhs

)

Copy constructor.

virtual ~CVMappingTerm

(

)

[virtual]

Destructor.

---

Member Function Documentation

const String& getAccession

(

)

const

returns the accession string of the term

bool getAllowChildren

(

)

const

returns true if the children of this term are allowed to be used

const String& getCVIdentifierRef

(

)

const

returns the cv identifier reference string

bool getIsRepeatable

(

)

const

returns true if this term can be repeated, false otherwise

const String& getTermName

(

)

const

returns the name of the term

bool getUseTerm

(

)

const

returns true if the term can be used, false if only children are allowed

bool getUseTermName

(

)

const

returns whether the term name should be used, instead of the accession

bool operator!=

(

const CVMappingTerm &

rhs

)

const

inequality operator

CVMappingTerm& operator=

(

const CVMappingTerm &

rhs

)

Assignment operator.

bool operator==

(

const CVMappingTerm &

rhs

)

const

equality operator

void setAccession

(

const String &

accession

)

sets the accession string of the term

void setAllowChildren

(

bool

allow_children

)

sets whether children of this term are allowed

void setCVIdentifierRef

(

const String &

cv_identifier_ref

)

sets the cv identifier reference string, e.g. UO for unit obo

void setIsRepeatable

(

bool

is_repeatable

)

sets whether this term can be repeated

void setTermName

(

const String &

term_name

)

sets the name of the term

void setUseTerm

(

bool

use_term

)

sets whether the term itself can be used (or only its children)

void setUseTermName

(

bool

use_term_name

)

sets whether the term name should be used, instead of the accession

---

Member Data Documentation

String accession_ [protected]

bool allow_children_ [protected]

String cv_identifier_ref_ [protected]

bool is_repeatable_ [protected]

String term_name_ [protected]

bool use_term_ [protected]

bool use_term_name_ [protected]