FASTAFile Class Reference

This class serves for reading in FASTA files. More...

#include <OpenMS/FORMAT/FASTAFile.h>

List of all members.

Classes
struct	FASTAEntry
	FASTA entry type (identifier, description and sequence). More...
Public Member Functions
	FASTAFile ()
	Copy constructor.
virtual	~FASTAFile ()
	Destructor.
void	load (const String &filename, std::vector< FASTAEntry > &data)
	loads a FASTA file given by 'filename' and stores the information in 'data'
void	store (const String &filename, const std::vector< FASTAEntry > &data) const
	stores the data given by 'data' at the file 'filename'

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Detailed Description

This class serves for reading in FASTA files.

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Constructor & Destructor Documentation

FASTAFile

(

)

Copy constructor.

virtual ~FASTAFile

(

)

[virtual]

Destructor.

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Member Function Documentation

void load	(	const String &	filename,
		std::vector< FASTAEntry > &	data
	)

loads a FASTA file given by 'filename' and stores the information in 'data'

Exceptions:

	Exception::FileNotFound	is thrown if the file does not exists.
	Exception::ParseError	is thrown if the file does not suit to the standard.

void store	(	const String &	filename,
		const std::vector< FASTAEntry > &	data
	)			const

stores the data given by 'data' at the file 'filename'

Exceptions:

Exception::UnableToCreateFile

is thrown if the process is not able to write the file.