| apply(std::vector< PeptideIdentification > &fwd_ids, std::vector< PeptideIdentification > &rev_ids) | FalseDiscoveryRate | |
| apply(std::vector< PeptideIdentification > &id) | FalseDiscoveryRate | |
| apply(std::vector< ProteinIdentification > &fwd_ids, std::vector< ProteinIdentification > &rev_ids) | FalseDiscoveryRate | |
| apply(std::vector< ProteinIdentification > &ids) | FalseDiscoveryRate | |
| calculateFDRs_(Map< DoubleReal, DoubleReal > &score_to_fdr, std::vector< DoubleReal > &target_scores, std::vector< DoubleReal > &decoy_scores, bool q_value, bool higher_score_better) | FalseDiscoveryRate | [private] |
| check_defaults_ | DefaultParamHandler | [protected] |
| DefaultParamHandler(const String &name) | DefaultParamHandler | |
| DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler | |
| defaults_ | DefaultParamHandler | [protected] |
| defaultsToParam_() | DefaultParamHandler | [protected] |
| error_name_ | DefaultParamHandler | [protected] |
| FalseDiscoveryRate() | FalseDiscoveryRate | |
| FalseDiscoveryRate(const FalseDiscoveryRate &) | FalseDiscoveryRate | [private] |
| getDefaults() const | DefaultParamHandler | |
| getName() const | DefaultParamHandler | |
| getParameters() const | DefaultParamHandler | |
| getSubsections() const | DefaultParamHandler | |
| operator=(const FalseDiscoveryRate &) | FalseDiscoveryRate | [private] |
| OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | [virtual] |
| operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | [virtual] |
| param_ | DefaultParamHandler | [protected] |
| setName(const String &name) | DefaultParamHandler | |
| setParameters(const Param ¶m) | DefaultParamHandler | |
| subsections_ | DefaultParamHandler | [protected] |
| updateMembers_() | DefaultParamHandler | [protected, virtual] |
| warn_empty_defaults_ | DefaultParamHandler | [protected] |
| ~DefaultParamHandler() | DefaultParamHandler | [virtual] |
| OpenMS / TOPP release 1.10.0 | Documentation generated on Thu Mar 7 2013 09:42:49 using doxygen 1.7.1 |