This is the complete list of members for
FeatureFindingMetabo, including all inherited members.
| begin_ | ProgressLogger | [mutable, protected] |
| charge_lower_bound_ | FeatureFindingMetabo | [private] |
| charge_upper_bound_ | FeatureFindingMetabo | [private] |
| check_defaults_ | DefaultParamHandler | [protected] |
| chrom_fwhm_ | FeatureFindingMetabo | [private] |
| CMD enum value | ProgressLogger | |
| computeAveragineSimScore_(const std::vector< DoubleReal > &, const DoubleReal &) | FeatureFindingMetabo | [private] |
| computeCosineSim_(const std::vector< DoubleReal > &, const std::vector< DoubleReal > &) | FeatureFindingMetabo | [private] |
| computeOLSCoeff_(const std::vector< DoubleReal > &, const std::vector< DoubleReal > &) | FeatureFindingMetabo | [private] |
| DefaultParamHandler(const String &name) | DefaultParamHandler | |
| DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler | |
| defaults_ | DefaultParamHandler | [protected] |
| defaultsToParam_() | DefaultParamHandler | [protected] |
| disable_isotope_filtering_ | FeatureFindingMetabo | [private] |
| dlg_ | ProgressLogger | [mutable, protected] |
| end_ | ProgressLogger | [mutable, protected] |
| endProgress() const | ProgressLogger | |
| error_name_ | DefaultParamHandler | [protected] |
| FeatureFindingMetabo() | FeatureFindingMetabo | |
| findLocalFeatures_(std::vector< MassTrace * > &, std::vector< FeatureHypothesis > &) | FeatureFindingMetabo | [private] |
| getDefaults() const | DefaultParamHandler | |
| getLogType() const | ProgressLogger | |
| getName() const | DefaultParamHandler | |
| getParameters() const | DefaultParamHandler | |
| getSubsections() const | DefaultParamHandler | |
| GUI enum value | ProgressLogger | |
| isLegalIsotopePattern2_(FeatureHypothesis &) | FeatureFindingMetabo | [private] |
| isLegalIsotopePattern_(FeatureHypothesis &) | FeatureFindingMetabo | [private] |
| isotope_filt_svm_ | FeatureFindingMetabo | [private] |
| isotope_model_ | FeatureFindingMetabo | [private] |
| last_invoke_ | ProgressLogger | [mutable, protected] |
| loadIsotopeModel_(const String &) | FeatureFindingMetabo | [private] |
| local_mz_range_ | FeatureFindingMetabo | [private] |
| local_rt_range_ | FeatureFindingMetabo | [private] |
| LogType enum name | ProgressLogger | |
| NONE enum value | ProgressLogger | |
| operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | [virtual] |
| operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | [virtual] |
| param_ | DefaultParamHandler | [protected] |
| ProgressLogger() | ProgressLogger | |
| recursion_depth_ | ProgressLogger | [protected, static] |
| report_summed_ints_ | FeatureFindingMetabo | [private] |
| run(std::vector< MassTrace > &, FeatureMap<> &) | FeatureFindingMetabo | |
| scoreMZ_(const MassTrace &, const MassTrace &, Size, Size) | FeatureFindingMetabo | [private] |
| scoreRT_(const MassTrace &, const MassTrace &) | FeatureFindingMetabo | [private] |
| setLogType(LogType type) const | ProgressLogger | |
| setName(const String &name) | DefaultParamHandler | |
| setParameters(const Param ¶m) | DefaultParamHandler | |
| setProgress(SignedSize value) const | ProgressLogger | |
| startProgress(SignedSize begin, SignedSize end, const String &label) const | ProgressLogger | |
| stop_watch_ | ProgressLogger | [mutable, protected] |
| subsections_ | DefaultParamHandler | [protected] |
| svm_feat_centers_ | FeatureFindingMetabo | [private] |
| svm_feat_scales_ | FeatureFindingMetabo | [private] |
| total_intensity_ | FeatureFindingMetabo | [private] |
| type_ | ProgressLogger | [mutable, protected] |
| updateMembers_() | FeatureFindingMetabo | [protected, virtual] |
| OpenMS::DefaultParamHandler::updateMembers_() | DefaultParamHandler | [protected, virtual] |
| use_smoothed_intensities_ | FeatureFindingMetabo | [private] |
| value_ | ProgressLogger | [mutable, protected] |
| warn_empty_defaults_ | DefaultParamHandler | [protected] |
| ~DefaultParamHandler() | DefaultParamHandler | [virtual] |
| ~FeatureFindingMetabo() | FeatureFindingMetabo | [virtual] |
| ~ProgressLogger() | ProgressLogger | |