GoodDiffFilter counts the number ob peak pairs whose m/z difference can be explained by a amino acid loss. More...
#include <OpenMS/FILTERING/TRANSFORMERS/GoodDiffFilter.h>
Inheritance diagram for GoodDiffFilter:
Public Member Functions | |
| GoodDiffFilter () | |
| default constructor | |
| GoodDiffFilter (const GoodDiffFilter &source) | |
| copy constructor | |
| virtual | ~GoodDiffFilter () |
| destructor | |
| GoodDiffFilter & | operator= (const GoodDiffFilter &source) |
| assignment operator | |
Private Attributes | |
| std::map< double, char > | aamass_ |
| list of unique amino acid masses | |
|
| |
| template<typename SpectrumType > | |
| double | apply (SpectrumType &spectrum) |
| function call operator | |
| static FilterFunctor * | create () |
| static const String | getProductName () |
Detailed Description
GoodDiffFilter counts the number ob peak pairs whose m/z difference can be explained by a amino acid loss.
Parameters of this class are:| Name | Type | Default | Restrictions | Description |
|---|---|---|---|---|
| tolerance | float | 0.37 | Tolerance value as defined by Bern et al. |
Note:
- If a section name is documented, the documentation is displayed as tooltip.
- Advanced parameter names are italic.
Constructor & Destructor Documentation
| GoodDiffFilter | ( | ) |
default constructor
| GoodDiffFilter | ( | const GoodDiffFilter & | source | ) |
copy constructor
| virtual ~GoodDiffFilter | ( | ) | [virtual] |
destructor
Member Function Documentation
| double apply | ( | SpectrumType & | ) | [inline] |
function call operator
Reimplemented from FilterFunctor.
| static FilterFunctor* create | ( | ) | [inline, static] |
| static const String getProductName | ( | ) | [inline, static] |
| GoodDiffFilter& operator= | ( | const GoodDiffFilter & | source | ) |
assignment operator
Member Data Documentation
| OpenMS / TOPP release 1.10.0 | Documentation generated on Thu Mar 7 2013 09:42:53 using doxygen 1.7.1 |