This is the complete list of members for
IDDecoyProbability, including all inherited members.
| apply(std::vector< PeptideIdentification > &prob_ids, const std::vector< PeptideIdentification > &fwd_ids, const std::vector< PeptideIdentification > &rev_ids) | IDDecoyProbability | |
| apply(std::vector< PeptideIdentification > &ids) | IDDecoyProbability | |
| apply_(std::vector< PeptideIdentification > &ids, const std::vector< DoubleReal > &rev_scores, const std::vector< DoubleReal > &fwd_scores, const std::vector< DoubleReal > &all_scores) | IDDecoyProbability | [protected] |
| check_defaults_ | DefaultParamHandler | [protected] |
| DefaultParamHandler(const String &name) | DefaultParamHandler | |
| DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler | |
| defaults_ | DefaultParamHandler | [protected] |
| defaultsToParam_() | DefaultParamHandler | [protected] |
| error_name_ | DefaultParamHandler | [protected] |
| generateDistributionImage_(const std::vector< DoubleReal > &ids, const String &formula, const String &filename) | IDDecoyProbability | [protected] |
| generateDistributionImage_(const std::vector< DoubleReal > &all_ids, const Transformation_ &all_trans, const String &fwd_formula, const String &rev_formula, const String &filename) | IDDecoyProbability | [protected] |
| getDefaults() const | DefaultParamHandler | |
| getName() const | DefaultParamHandler | |
| getParameters() const | DefaultParamHandler | |
| getProbability_(const Math::GammaDistributionFitter::GammaDistributionFitResult &result_gamma, const Transformation_ &gamma_trafo, const Math::GaussFitter::GaussFitResult &result_gauss, const Transformation_ &gauss_trafo, DoubleReal score) | IDDecoyProbability | [protected] |
| getSubsections() const | DefaultParamHandler | |
| IDDecoyProbability() | IDDecoyProbability | |
| IDDecoyProbability(const IDDecoyProbability &rhs) | IDDecoyProbability | |
| normalizeBins_(const std::vector< DoubleReal > &scores, std::vector< DoubleReal > &binned, Transformation_ &trafo) | IDDecoyProbability | [protected] |
| operator=(const IDDecoyProbability &rhs) | IDDecoyProbability | |
| OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | [virtual] |
| operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | [virtual] |
| param_ | DefaultParamHandler | [protected] |
| setName(const String &name) | DefaultParamHandler | |
| setParameters(const Param ¶m) | DefaultParamHandler | |
| subsections_ | DefaultParamHandler | [protected] |
| updateMembers_() | DefaultParamHandler | [protected, virtual] |
| warn_empty_defaults_ | DefaultParamHandler | [protected] |
| ~DefaultParamHandler() | DefaultParamHandler | [virtual] |
| ~IDDecoyProbability() | IDDecoyProbability | [virtual] |