This is the complete list of members for
IDMapper, including all inherited members.
| annotate(MSExperiment< PeakType > &map, const std::vector< PeptideIdentification > &ids, const std::vector< ProteinIdentification > &protein_ids) | IDMapper | [inline] |
| annotate(FeatureMap< FeatureType > &map, const std::vector< PeptideIdentification > &ids, const std::vector< ProteinIdentification > &protein_ids, bool use_centroid_rt=false, bool use_centroid_mz=false) | IDMapper | [inline] |
| annotate(ConsensusMap &map, const std::vector< PeptideIdentification > &ids, const std::vector< ProteinIdentification > &protein_ids, bool measure_from_subelements=false) | IDMapper | |
| check_defaults_ | DefaultParamHandler | [protected] |
| checkHits_(const std::vector< PeptideIdentification > &ids) const | IDMapper | [protected] |
| checkMassType_(const std::vector< DataProcessing > &processing) const | IDMapper | [protected] |
| DefaultParamHandler(const String &name) | DefaultParamHandler | |
| DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler | |
| defaults_ | DefaultParamHandler | [protected] |
| defaultsToParam_() | DefaultParamHandler | [protected] |
| error_name_ | DefaultParamHandler | [protected] |
| getAbsoluteMZTolerance_(const DoubleReal mz) const | IDMapper | [protected] |
| getDefaults() const | DefaultParamHandler | |
| getIDDetails_(const PeptideIdentification &id, DoubleReal &rt_pep, DoubleList &mz_values, IntList &charges, bool use_avg_mass=false) const | IDMapper | [protected] |
| getName() const | DefaultParamHandler | |
| getParameters() const | DefaultParamHandler | |
| getSubsections() const | DefaultParamHandler | |
| IDMapper() | IDMapper | |
| IDMapper(const IDMapper &cp) | IDMapper | |
| ignore_charge_ | IDMapper | [protected] |
| increaseBoundingBox_(DBoundingBox< 2 > &box) | IDMapper | [protected] |
| isMatch_(const DoubleReal rt_distance, const DoubleReal mz_theoretical, const DoubleReal mz_observed) const | IDMapper | [protected] |
| Measure enum name | IDMapper | |
| measure_ | IDMapper | [protected] |
| MEASURE_DA enum value | IDMapper | |
| MEASURE_PPM enum value | IDMapper | |
| mz_tolerance_ | IDMapper | [protected] |
| operator=(const IDMapper &rhs) | IDMapper | |
| OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | [virtual] |
| operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | [virtual] |
| param_ | DefaultParamHandler | [protected] |
| rt_tolerance_ | IDMapper | [protected] |
| setName(const String &name) | DefaultParamHandler | |
| setParameters(const Param ¶m) | DefaultParamHandler | |
| subsections_ | DefaultParamHandler | [protected] |
| updateMembers_() | IDMapper | [protected, virtual] |
| warn_empty_defaults_ | DefaultParamHandler | [protected] |
| ~DefaultParamHandler() | DefaultParamHandler | [virtual] |