IsotopeMarker marks peak pairs which could represent an ion and its isotope. More...
#include <OpenMS/FILTERING/TRANSFORMERS/IsotopeMarker.h>
Inheritance diagram for IsotopeMarker:
Public Member Functions | |
| IsotopeMarker () | |
| default constructor | |
| IsotopeMarker (const IsotopeMarker &source) | |
| copy constructor | |
| virtual | ~IsotopeMarker () |
| destructor | |
| IsotopeMarker & | operator= (const IsotopeMarker &source) |
| assignment operator | |
|
| |
| template<typename SpectrumType > | |
| void | apply (std::map< double, bool > &marked, SpectrumType &spectrum) |
| method to mark peaks | |
| static PeakMarker * | create () |
| static const String | getProductName () |
Detailed Description
IsotopeMarker marks peak pairs which could represent an ion and its isotope.
- Todo:
- implement a real isotope marking here with isotopedistributions and fitting (Andreas)
| Name | Type | Default | Restrictions | Description |
|---|---|---|---|---|
| marks | int | 1 | How often a peak must be marked to be reported | |
| mz_variation | float | 0.1 | variation in m/z direction | |
| in_variation | float | 0.5 | variation in intensity |
Note:
- If a section name is documented, the documentation is displayed as tooltip.
- Advanced parameter names are italic.
Constructor & Destructor Documentation
| IsotopeMarker | ( | ) |
default constructor
| IsotopeMarker | ( | const IsotopeMarker & | source | ) |
copy constructor
| virtual ~IsotopeMarker | ( | ) | [virtual] |
destructor
Member Function Documentation
| void apply | ( | std::map< double, bool > & | , | |
| SpectrumType & | ||||
| ) | [inline] |
method to mark peaks
Reimplemented from PeakMarker.
| static PeakMarker* create | ( | ) | [inline, static] |
| static const String getProductName | ( | ) | [inline, static] |
Reimplemented from PeakMarker.
| IsotopeMarker& operator= | ( | const IsotopeMarker & | source | ) |
assignment operator
| OpenMS / TOPP release 1.10.0 | Documentation generated on Thu Mar 7 2013 09:42:53 using doxygen 1.7.1 |