Abstract base class for all kinds of labeling techniques. More...
#include <OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h>
Public Member Functions | |
| LabelFreeLabeler () | |
| default constructor | |
| virtual | ~LabelFreeLabeler () |
| destructor | |
| void | preCheck (Param ¶m) const |
| Checks the (simulation) params passed if they are consistent with the labeling technique. | |
| void | setUpHook (FeatureMapSimVector &) |
| Hook to prepare the simulation process. | |
| void | postDigestHook (FeatureMapSimVector &) |
| Labeling between digestion and rt simulation. | |
| void | postRTHook (FeatureMapSimVector &) |
| Labeling after rt simulation. | |
| void | postDetectabilityHook (FeatureMapSimVector &) |
| Labeling after detectability simulation. | |
| void | postIonizationHook (FeatureMapSimVector &) |
| Labeling after ionization. | |
| void | postRawMSHook (FeatureMapSimVector &) |
| Labeling after raw signal generation. | |
| void | postRawTandemMSHook (FeatureMapSimVector &, MSSimExperiment &) |
| Labeling after Tandem MS (e.g. iTRAQ). | |
Static Public Member Functions | |
| static BaseLabeler * | create () |
| create new GaussModel object (needed by Factory) | |
| static const String | getProductName () |
| name of the model (needed by Factory) | |
Detailed Description
Abstract base class for all kinds of labeling techniques.
Constructor & Destructor Documentation
| LabelFreeLabeler | ( | ) |
default constructor
| virtual ~LabelFreeLabeler | ( | ) | [virtual] |
destructor
Member Function Documentation
| static BaseLabeler* create | ( | ) | [inline, static] |
create new GaussModel object (needed by Factory)
Referenced by BaseLabeler::registerChildren().
| static const String getProductName | ( | ) | [inline, static] |
name of the model (needed by Factory)
Referenced by BaseLabeler::registerChildren().
| void postDetectabilityHook | ( | FeatureMapSimVector & | ) | [virtual] |
Labeling after detectability simulation.
Implements BaseLabeler.
| void postDigestHook | ( | FeatureMapSimVector & | ) | [virtual] |
Labeling between digestion and rt simulation.
Implements BaseLabeler.
| void postIonizationHook | ( | FeatureMapSimVector & | ) | [virtual] |
Labeling after ionization.
Implements BaseLabeler.
| void postRawMSHook | ( | FeatureMapSimVector & | ) | [virtual] |
Labeling after raw signal generation.
Implements BaseLabeler.
| void postRawTandemMSHook | ( | FeatureMapSimVector & | , | |
| MSSimExperiment & | ||||
| ) | [virtual] |
Labeling after Tandem MS (e.g. iTRAQ).
Implements BaseLabeler.
| void postRTHook | ( | FeatureMapSimVector & | ) | [virtual] |
Labeling after rt simulation.
Implements BaseLabeler.
| void preCheck | ( | Param & | param | ) | const [virtual] |
Checks the (simulation) params passed if they are consistent with the labeling technique.
- Parameters:
-
param Param object containing the simulation parameters
- Exceptions:
-
Exception::InvalidParameter if the given parameters are not consistent with the labeling technique
Implements BaseLabeler.
| void setUpHook | ( | FeatureMapSimVector & | ) | [virtual] |
Hook to prepare the simulation process.
Implements BaseLabeler.
| OpenMS / TOPP release 1.10.0 | Documentation generated on Thu Mar 7 2013 09:42:56 using doxygen 1.7.1 |