MapAlignmentTransformer Class Reference

The MapAlignmentTransformer class. More...

#include <OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h>

List of all members.

Static Public Member Functions
static void	transformPeakMaps (std::vector< MSExperiment<> > &maps, const std::vector< TransformationDescription > &given_trafos)
	Applies the given transformations to peak maps.
static void	transformFeatureMaps (std::vector< FeatureMap<> > &maps, const std::vector< TransformationDescription > &given_trafos)
	Applies the given transformations to feature maps.
static void	transformConsensusMaps (std::vector< ConsensusMap > &maps, const std::vector< TransformationDescription > &given_trafos)
	Applies the given transformations to consensus maps.
static void	transformPeptideIdentifications (std::vector< std::vector< PeptideIdentification > > &maps, const std::vector< TransformationDescription > &given_trafos)
	Applies the given transformations to peptide identifications.
static void	transformSinglePeakMap (MSExperiment<> &msexp, const TransformationDescription &trafo)
	Applies the given transformations to a single peak map.
static void	transformSingleFeatureMap (FeatureMap<> &fmap, const TransformationDescription &trafo)
	Applies the given transformations to a single feature map.
static void	transformSingleConsensusMap (ConsensusMap &cmap, const TransformationDescription &trafo)
	Applies the given transformations to a single consensus map.
static void	transformSinglePeptideIdentification (std::vector< PeptideIdentification > &pepids, const TransformationDescription &trafo)
	Applies the given transformations to a single peptide identification.
Static Private Member Functions
static void	applyToFeature_ (Feature &feature, const TransformationDescription &trafo)
	apply a transformation to a feature
static void	applyToBaseFeature_ (BaseFeature &feature, const TransformationDescription &trafo)
	apply a transformation to a basic feature
static void	applyToConsensusFeature_ (ConsensusFeature &feature, const TransformationDescription &trafo)
	apply a transformation to a consensus feature

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Detailed Description

The MapAlignmentTransformer class.

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Member Function Documentation

static void applyToBaseFeature_	(	BaseFeature &	feature,
		const TransformationDescription &	trafo
	)			[static, private]

apply a transformation to a basic feature

static void applyToConsensusFeature_	(	ConsensusFeature &	feature,
		const TransformationDescription &	trafo
	)			[static, private]

apply a transformation to a consensus feature

static void applyToFeature_	(	Feature &	feature,
		const TransformationDescription &	trafo
	)			[static, private]

apply a transformation to a feature

static void transformConsensusMaps	(	std::vector< ConsensusMap > &	maps,
		const std::vector< TransformationDescription > &	given_trafos
	)			[static]

Applies the given transformations to consensus maps.

static void transformFeatureMaps	(	std::vector< FeatureMap<> > &	maps,
		const std::vector< TransformationDescription > &	given_trafos
	)			[static]

Applies the given transformations to feature maps.

static void transformPeakMaps	(	std::vector< MSExperiment<> > &	maps,
		const std::vector< TransformationDescription > &	given_trafos
	)			[static]

Applies the given transformations to peak maps.

static void transformPeptideIdentifications	(	std::vector< std::vector< PeptideIdentification > > &	maps,
		const std::vector< TransformationDescription > &	given_trafos
	)			[static]

Applies the given transformations to peptide identifications.

static void transformSingleConsensusMap	(	ConsensusMap &	cmap,
		const TransformationDescription &	trafo
	)			[static]

Applies the given transformations to a single consensus map.

static void transformSingleFeatureMap	(	FeatureMap<> &	fmap,
		const TransformationDescription &	trafo
	)			[static]

Applies the given transformations to a single feature map.

static void transformSinglePeakMap	(	MSExperiment<> &	msexp,
		const TransformationDescription &	trafo
	)			[static]

Applies the given transformations to a single peak map.

static void transformSinglePeptideIdentification	(	std::vector< PeptideIdentification > &	pepids,
		const TransformationDescription &	trafo
	)			[static]

Applies the given transformations to a single peptide identification.