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ModelFitter< PeakType, FeatureType > Member List

This is the complete list of members for ModelFitter< PeakType, FeatureType >, including all inherited members.
addConvexHull(const FeatureFinderDefs::IndexSet &set, Feature &feature) const FeaFiModule< PeakType, FeatureType > [inline]
algorithm_ModelFitter< PeakType, FeatureType > [protected]
Base typedefModelFitter< PeakType, FeatureType >
basic_stat_ModelFitter< PeakType, FeatureType > [protected]
ChargedIndexSet typedefFeatureFinderDefs
ChargeType typedefModelFitter< PeakType, FeatureType >
check_defaults_DefaultParamHandler [protected]
CoordinateType typedefModelFitter< PeakType, FeatureType >
OpenMS::FeaFiModule::CoordinateType typedefFeaFiModule< PeakType, FeatureType >
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
defaults_DefaultParamHandler [protected]
defaultsToParam_()DefaultParamHandler [protected]
deltaAbsError_ModelFitter< PeakType, FeatureType > [protected]
deltaRelError_ModelFitter< PeakType, FeatureType > [protected]
doProjectionDim_(const Int dim, const ChargedIndexSet &index_set, RawDataArrayType &set) const ModelFitter< PeakType, FeatureType > [inline, protected]
error_name_DefaultParamHandler [protected]
evaluate_(const IndexSet &set) const ModelFitter< PeakType, FeatureType > [inline, protected]
FeaFiModule(const MSExperiment< PeakType > *map, FeatureMap< FeatureType > *features, FeatureFinder *ff)FeaFiModule< PeakType, FeatureType > [inline]
FeatureMapType typedefFeaFiModule< PeakType, FeatureType >
features_FeaFiModule< PeakType, FeatureType > [protected]
ff_FeaFiModule< PeakType, FeatureType > [protected]
first_mz_model_ModelFitter< PeakType, FeatureType > [protected]
fit(const ChargedIndexSet &index_set)ModelFitter< PeakType, FeatureType > [inline]
fitMZ_(InterpolationModel *&model, const ChargeType &charge) const ModelFitter< PeakType, FeatureType > [inline, protected]
fitMZLoop_(const ChargedIndexSet &set, const ChargeType &charge)ModelFitter< PeakType, FeatureType > [inline, protected]
fitRT_(InterpolationModel *&model) const ModelFitter< PeakType, FeatureType > [inline, protected]
Flag enum nameFeatureFinderDefs
getDefaults() const DefaultParamHandler
getName() const DefaultParamHandler
getNextMz(FeatureFinderDefs::IndexPair &index) const FeaFiModule< PeakType, FeatureType > [inline]
getNextRt(FeatureFinderDefs::IndexPair &index)FeaFiModule< PeakType, FeatureType > [inline]
getParameters() const DefaultParamHandler
getPeakIntensity(const FeatureFinderDefs::IndexPair &index) const FeaFiModule< PeakType, FeatureType > [inline]
getPeakMz(const FeatureFinderDefs::IndexPair &index) const FeaFiModule< PeakType, FeatureType > [inline]
getPeakRt(const FeatureFinderDefs::IndexPair &index) const FeaFiModule< PeakType, FeatureType > [inline]
getPrevMz(FeatureFinderDefs::IndexPair &index) const FeaFiModule< PeakType, FeatureType > [inline]
getPrevRt(FeatureFinderDefs::IndexPair &index)FeaFiModule< PeakType, FeatureType > [inline]
getSubsections() const DefaultParamHandler
IndexPair typedefFeatureFinderDefs
IndexSet typedefFeatureFinderDefs
IndexSetIter typedefModelFitter< PeakType, FeatureType >
IntensityType typedefModelFitter< PeakType, FeatureType >
OpenMS::FeaFiModule::IntensityType typedefFeaFiModule< PeakType, FeatureType >
interpolation_step_mz_ModelFitter< PeakType, FeatureType > [protected]
interpolation_step_rt_ModelFitter< PeakType, FeatureType > [protected]
iso_stdev_first_ModelFitter< PeakType, FeatureType > [protected]
iso_stdev_last_ModelFitter< PeakType, FeatureType > [protected]
iso_stdev_stepsize_ModelFitter< PeakType, FeatureType > [protected]
isotope_stdev_ModelFitter< PeakType, FeatureType > [protected]
last_mz_model_ModelFitter< PeakType, FeatureType > [protected]
map_FeaFiModule< PeakType, FeatureType > [protected]
MapType typedefFeaFiModule< PeakType, FeatureType >
max_isotope_ModelFitter< PeakType, FeatureType > [protected]
max_iteration_ModelFitter< PeakType, FeatureType > [protected]
model2D_ModelFitter< PeakType, FeatureType > [protected]
ModelFitter(const MSExperiment< PeakType > *map, FeatureMap< FeatureType > *features, FeatureFinder *ff)ModelFitter< PeakType, FeatureType > [inline]
ModelFitter()ModelFitter< PeakType, FeatureType > [private]
ModelFitter(const ModelFitter &)ModelFitter< PeakType, FeatureType > [private]
monoisotopic_mz_ModelFitter< PeakType, FeatureType > [protected]
MZ enum valueModelFitter< PeakType, FeatureType >
mz_input_data_ModelFitter< PeakType, FeatureType > [protected]
mz_stat_ModelFitter< PeakType, FeatureType > [protected]
operator=(const ModelFitter &)ModelFitter< PeakType, FeatureType > [private]
OpenMS::FeaFiModule::OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs)DefaultParamHandler [virtual]
operator==(const DefaultParamHandler &rhs) const DefaultParamHandler [virtual]
param_DefaultParamHandler [protected]
quality_mz_ModelFitter< PeakType, FeatureType > [protected]
quality_rt_ModelFitter< PeakType, FeatureType > [protected]
QualityType typedefModelFitter< PeakType, FeatureType >
RawDataArrayType typedefModelFitter< PeakType, FeatureType >
RT enum valueModelFitter< PeakType, FeatureType >
rt_input_data_ModelFitter< PeakType, FeatureType > [protected]
rt_stat_ModelFitter< PeakType, FeatureType > [protected]
setMonoIsotopicMass(CoordinateType mz)ModelFitter< PeakType, FeatureType > [inline]
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
SpectrumType typedefFeaFiModule< PeakType, FeatureType >
subsections_DefaultParamHandler [protected]
tolerance_stdev_box_ModelFitter< PeakType, FeatureType > [protected]
UNUSED enum valueFeatureFinderDefs
updateMembers_()ModelFitter< PeakType, FeatureType > [inline, protected, virtual]
OpenMS::FeaFiModule::updateMembers_()DefaultParamHandler [protected, virtual]
USED enum valueFeatureFinderDefs
warn_empty_defaults_DefaultParamHandler [protected]
~DefaultParamHandler()DefaultParamHandler [virtual]
~FeaFiModule()FeaFiModule< PeakType, FeatureType > [inline, virtual]
~ModelFitter()ModelFitter< PeakType, FeatureType > [inline, virtual]
OpenMS / TOPP release 1.10.0 Documentation generated on Thu Mar 7 2013 09:42:57 using doxygen 1.7.1