TargetedExperiment Member List

This is the complete list of members for TargetedExperiment, including all inherited members.

addCompound(const Compound &rhs)	TargetedExperiment
addContact(const Contact &contact)	TargetedExperiment
addCV(const CV &cv)	TargetedExperiment
addExcludeTarget(const IncludeExcludeTarget &target)	TargetedExperiment
addIncludeTarget(const IncludeExcludeTarget &target)	TargetedExperiment
addInstrument(const Instrument &instrument)	TargetedExperiment
addPeptide(const Peptide &rhs)	TargetedExperiment
addProtein(const Protein &protein)	TargetedExperiment
addPublication(const Publication &publication)	TargetedExperiment
addSoftware(const Software &software)	TargetedExperiment
addSourceFile(const SourceFile &source_file)	TargetedExperiment
addTargetCVTerm(const CVTerm &cv_term)	TargetedExperiment
addTransition(const ReactionMonitoringTransition &transition)	TargetedExperiment
clear(bool clear_meta_data)	TargetedExperiment
Compound typedef	TargetedExperiment
compounds_	TargetedExperiment	[protected]
Contact typedef	TargetedExperiment
contacts_	TargetedExperiment	[protected]
createPeptideReferenceMap_()	TargetedExperiment	[protected]
createProteinReferenceMap_()	TargetedExperiment	[protected]
CV typedef	TargetedExperiment
cvs_	TargetedExperiment	[protected]
exclude_targets_	TargetedExperiment	[protected]
getCompounds() const	TargetedExperiment
getContacts() const	TargetedExperiment
getCVs() const	TargetedExperiment
getExcludeTargets() const	TargetedExperiment
getIncludeTargets() const	TargetedExperiment
getInstruments() const	TargetedExperiment
getPeptideByRef(const String &ref)	TargetedExperiment
getPeptides() const	TargetedExperiment
getProteinByRef(const String &ref)	TargetedExperiment
getProteins() const	TargetedExperiment
getPublications() const	TargetedExperiment
getSoftware() const	TargetedExperiment
getSourceFiles() const	TargetedExperiment
getTargetCVTerms() const	TargetedExperiment
getTransitions() const	TargetedExperiment
include_targets_	TargetedExperiment	[protected]
Instrument typedef	TargetedExperiment
instruments_	TargetedExperiment	[protected]
operator+(const TargetedExperiment &rhs) const	TargetedExperiment
operator+=(const TargetedExperiment &rhs)	TargetedExperiment
operator=(const TargetedExperiment &rhs)	TargetedExperiment
operator==(const TargetedExperiment &rhs) const	TargetedExperiment
Peptide typedef	TargetedExperiment
peptide_reference_map_	TargetedExperiment	[protected]
peptide_reference_map_dirty_	TargetedExperiment	[protected]
PeptideReferenceMapType typedef	TargetedExperiment
peptides_	TargetedExperiment	[protected]
Prediction typedef	TargetedExperiment
Protein typedef	TargetedExperiment
protein_reference_map_	TargetedExperiment	[protected]
protein_reference_map_dirty_	TargetedExperiment	[protected]
ProteinReferenceMapType typedef	TargetedExperiment
proteins_	TargetedExperiment	[protected]
Publication typedef	TargetedExperiment
publications_	TargetedExperiment	[protected]
RetentionTime typedef	TargetedExperiment
setCompounds(const std::vector< Compound > &rhs)	TargetedExperiment
setContacts(const std::vector< Contact > &contacts)	TargetedExperiment
setCVs(const std::vector< CV > &cvs)	TargetedExperiment
setExcludeTargets(const std::vector< IncludeExcludeTarget > &targets)	TargetedExperiment
setIncludeTargets(const std::vector< IncludeExcludeTarget > &targets)	TargetedExperiment
setInstruments(const std::vector< Instrument > &instruments)	TargetedExperiment
setPeptides(const std::vector< Peptide > &rhs)	TargetedExperiment
setProteins(const std::vector< Protein > &proteins)	TargetedExperiment
setPublications(const std::vector< Publication > &publications)	TargetedExperiment
setSoftware(const std::vector< Software > &software)	TargetedExperiment
setSourceFiles(const std::vector< SourceFile > &source_files)	TargetedExperiment
setTargetCVTerms(const CVTermList &cv_terms)	TargetedExperiment
setTargetMetaValue(const String &name, const DataValue &value)	TargetedExperiment
setTransitions(const std::vector< ReactionMonitoringTransition > &transitions)	TargetedExperiment
software_	TargetedExperiment	[protected]
sortTransitionsByProductMZ()	TargetedExperiment
source_files_	TargetedExperiment	[protected]
TargetedExperiment()	TargetedExperiment
TargetedExperiment(const TargetedExperiment &rhs)	TargetedExperiment
targets_	TargetedExperiment	[protected]
transitions_	TargetedExperiment	[protected]
~TargetedExperiment()	TargetedExperiment	[virtual]