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Peptide Class Reference

#include <OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h>

Inheritance diagram for Peptide:
CVTermList MetaInfoInterface

List of all members.

Classes

struct  Modification

Public Member Functions

 Peptide ()
 Peptide (const Peptide &rhs)
Peptide & operator= (const Peptide &rhs)
bool operator== (const Peptide &rhs) const
void setChargeState (int charge)
int getChargeState () const
void setPeptideGroupLabel (const String &label)
String getPeptideGroupLabel () const

Public Attributes

std::vector< RetentionTime > rts
String id
std::vector< String > protein_refs
CVTermList evidence
String sequence
std::vector< Modification > mods

Protected Attributes

int charge_
Int peptide_group_label_
std::vector< String > * peptide_group_labels_

Constructor & Destructor Documentation

Peptide (  )  [inline]
Peptide ( const Peptide &  rhs  )  [inline]

Member Function Documentation

int getChargeState (  )  const [inline]
String getPeptideGroupLabel (  )  const [inline]
Peptide& operator= ( const Peptide &  rhs  )  [inline]

References Peptide::charge_, Peptide::evidence, Peptide::id, Peptide::mods, CVTermList::operator=(), Peptide::peptide_group_label_, Peptide::peptide_group_labels_, Peptide::protein_refs, Peptide::rts, and Peptide::sequence.

bool operator== ( const Peptide &  rhs  )  const [inline]

References Peptide::charge_, Peptide::evidence, Peptide::id, Peptide::mods, CVTermList::operator==(), Peptide::peptide_group_label_, Peptide::peptide_group_labels_, Peptide::protein_refs, Peptide::rts, and Peptide::sequence.

void setChargeState ( int  charge  )  [inline]
void setPeptideGroupLabel ( const String &  label  )  [inline]

Member Data Documentation

int charge_ [protected]

Referenced by Peptide::operator=(), and Peptide::operator==().

CVTermList evidence

Referenced by Peptide::operator=(), and Peptide::operator==().

String id

Referenced by ChromatogramExtractor::extractChromatograms(), Peptide::operator=(), Peptide::operator==(), and ChromatogramExtractor::prepareSpectra_().

std::vector<Modification> mods

Referenced by Peptide::operator=(), and Peptide::operator==().

Int peptide_group_label_ [protected]

Referenced by Peptide::operator=(), and Peptide::operator==().

std::vector<String>* peptide_group_labels_ [protected]

Referenced by Peptide::operator=(), and Peptide::operator==().

std::vector<String> protein_refs

Referenced by Peptide::operator=(), and Peptide::operator==().

std::vector<RetentionTime> rts

Referenced by ChromatogramExtractor::extractChromatograms(), Peptide::operator=(), and Peptide::operator==().

String sequence

Referenced by Peptide::operator=(), Peptide::operator==(), and ChromatogramExtractor::prepareSpectra_().

OpenMS / TOPP release 1.10.0 Documentation generated on Thu Mar 7 2013 09:43:00 using doxygen 1.7.1