An abstract templatized parser to load the data that is used to initialize Alphabet objects. More...

#include <OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetParser.h>

Public Types
typedef Container	ContainerType
Public Member Functions
void	load (const std::string &fname)
virtual ContainerType &	getElements ()=0
virtual void	parse (InputSource &is)=0
virtual	~IMSAlphabetParser ()
	Destructor.

Detailed Description

template<typename AlphabetElementType = double, typename Container = std::map<std::string, AlphabetElementType>, typename InputSource = std::istream>
class OpenMS::ims::IMSAlphabetParser< AlphabetElementType, Container, InputSource >

An abstract templatized parser to load the data that is used to initialize Alphabet objects.

AlphabetParser reads the input source, which is given as a template parameter InputSource , by load (const std::string& fname) function where fname is the source name. Loaded data can be retrieved by calling getElements().

See also:: Alphabet

Member Typedef Documentation

typedef Container ContainerType

Type of data to be loaded.

Constructor & Destructor Documentation

virtual ~IMSAlphabetParser ( ) [inline, virtual]

Destructor.

Member Function Documentation

virtual ContainerType& getElements ( ) [pure virtual]

Gets the data that was loaded.

Returns:: The data.

Implemented in IMSAlphabetTextParser.

void load ( const std::string & fname )

Loads the data from the InputSource with the name fname. If there is an error occurred while reading data from InputSource, IOException is thrown.

Parameters:

fname

The name of the input source.

References IMSAlphabetParser< AlphabetElementType, Container, InputSource >::parse().

virtual void parse ( InputSource & is ) [pure virtual]

Parses the the given input source is .

Parameters:

is

The InputSource

Implemented in IMSAlphabetTextParser.

Referenced by IMSAlphabetParser< AlphabetElementType, Container, InputSource >::load().