Here is a list of all file members with links to the files they belong to:

- _ -

• __DEBUG_BEGIN_METHOD__ : TOPPASVertex.h
• __DEBUG_END_METHOD__ : TOPPASVertex.h

- a -

• ABORT_IF : ClassTest.h
• ADD_MESSAGE : ClassTest.h
• ALIGNMENT_DEBUG : SpectrumAlignment.h

- c -

• CoordinateType : AdditiveSeries.C
• CUDA_CHECK_ERROR : IsotopeWaveletConstants.h
• CUDA_SAFE_CALL : IsotopeWaveletTransform.h

- d -

• DEBUG_FEATUREFINDER : EGHFitter1D.h
• DEBUG_PEAK_PICKING : PeakPickerSH.h , PeakPickerHiRes.h

- e -

• END_SECTION : ClassTest.h
• END_TEST : ClassTest.h
• ERR : LevMarqFitter1D.h

- f -

• FIT : LevMarqFitter1D.h

- g -

• generateTargetSequences() : RNPxl.C
• GLP_PROB_DEFINED : LPWrapper.h

- i -

• IF_MASTERTHREAD : OpenSwathChromatogramExtractor.C
• initModificationMassesRNA() : RNPxl.C

- l -

• LOG_DEBUG : LogStream.h
• LOG_ERROR : LogStream.h
• LOG_FATAL_ERROR : LogStream.h
• LOG_INFO : LogStream.h
• LOG_WARN : LogStream.h

- m -

• MAGIC_NUMBER : CachedmzML.h
• main() : TOPPView.C , TOPPAS.C , INIFileEditor.C , RNPxlXICFilter.C , RNPxl.C , INIUpdater.C , IDDecoyProbability.C , SpectraFilterWindowMower.C , SpectraFilterThresholdMower.C , SpectraFilterSqrtMower.C , SpectraFilterScaler.C , SpectraFilterParentPeakMower.C , SpectraFilterNormalizer.C , SpectraFilterNLargest.C , SpectraFilterMarkerMower.C , SpectraFilterBernNorm.C , SILACAnalyzer.C , PILISSpectraGenerator.C , PILISModelTrainer.C , PILISModelCV.C , PILISIdentification.C , PhosphoScoring.C , InspectAdapter.C , HighResPrecursorMassCorrector.C , GenericWrapper.C , FeatureFinderRaw.C , FalseDiscoveryRate.C , DTAExtractor.C , DBImporter.C , DBExporter.C , CompNovoCID.C , CompNovo.C , AdditiveSeries.C

- n -

• NEW_TMP_FILE : ClassTest.h
• NOT_TESTABLE : ClassTest.h
• notInSeq() : RNPxl.C
• NULL : IsotopeWaveletParallelFor.h

- o -

• OPENMS_CHEMISTRY_ELEMENT_ATOMICNUMBER_DEFAULT : Element.h
• OPENMS_CHEMISTRY_ELEMENT_NAME_DEFAULT : Element.h
• OPENMS_CHEMISTRY_ELEMENT_SYMBOL_DEFAULT : Element.h
• OPENMS_CHEMISTRY_ELEMENT_WEIGHT_DEFAULT : Element.h
• OPENMS_IS_BIG_ENDIAN : Base64.h
• OPENMS_POSTCONDITION : Macros.h
• OPENMS_PRECONDITION : Macros.h

- p -

• print_usage() : TOPPAS.C , TOPPView.C

- r -

• RT_FACTOR : RNPxl.C
• RT_FACTOR_PRECISION : RNPxl.C
• RT_MODULO_FACTOR : RNPxl.C
• run_identifier : MRMFeatureFinderScoring.h

- s -

• SEP : DigestorMotif.C , RNPxl.C
• SortDoubleDoublePairFirst() : MRMFeatureFinderScoring.h
• START_SECTION : ClassTest.h
• START_TEST : ClassTest.h
• STATUS : ClassTest.h
• std__cout : ClassTest.h

- t -

• TEST_EQUAL : ClassTest.h
• TEST_EXCEPTION : ClassTest.h
• TEST_EXCEPTION_WITH_MESSAGE : ClassTest.h
• TEST_FILE_EQUAL : ClassTest.h
• TEST_FILE_SIMILAR : ClassTest.h
• TEST_NOT_EQUAL : ClassTest.h
• TEST_POSTCONDITION_VIOLATED : ClassTest.h
• TEST_PRECONDITION_VIOLATED : ClassTest.h
• TEST_REAL_SIMILAR : ClassTest.h
• TEST_STRING_EQUAL : ClassTest.h
• TEST_STRING_SIMILAR : ClassTest.h
• TOLERANCE_ABSOLUTE : ClassTest.h
• TOLERANCE_RELATIVE : ClassTest.h
• tool_name : TOPPView.C , TOPPAS.C

- u -

• USE_SP_INTERFACE : MRMFeatureFinderScoring.h

- v -

• V_SimplePairFinder : SimplePairFinder.h

- w -

• WHITELIST : ClassTest.h