06/02/2006

dtafilter1.c - simple ways to filter .dta files
mzxml2dta1.c - uses RAMP to create .dta files from mzXML; requires ZLIB - edit ZLIBROOT in the Makefile
runsearch1.c - our script to run a sequest search from an mzXML file
subsetdb1.c - creates subset fasta files, reverse databases, etc
plottic1.c - generates PNG images of TIC and BPC from an mzXML file; requires gnuplot
checkdb1.c - simple fasta checker that looks for duplicate headers & extra long header/definition lines

These are my little scripts to download protein sequence databases:
getdb.ipi
getdb.nci
getdb.sgd
getdb.swissprot

